Interaction Details


Details of experiments between O15085 and Q9NTX7
Note that the results of all experiments are listed, regardless of the modification states of the fragments.


Experiment series 1

Protein A

Protein: ARHGEF11
Fragment: 41-126
Site: PDZ
Construct: his6-MBP-TEVsite-PDZ

Protein B

Protein: RNF146
Fragment: 350-359
Site: PBM
Sequence: PDGQCTVTEV
Construct: biotin-ado-ado-PDGQCTVTEV
Average holdup BI: 0.39
Normalized holdup BI: 0.66
Immobilized partner concentration (10-6M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pKd: 5.09
PUBMED ID: 36115835
Experimental Details

Crude peptide synthesis product. The peptide concentration in the affinity conversion step may differ from reality causing a systematic error in reported affinities.