Interaction Details


Details of experiments between O15085 and Q15147
Note that the results of all experiments are listed, regardless of the modification states of the fragments.


Experiment series 1

Protein A

Protein: ARHGEF11
Fragment: 41-126
Site: PDZ
Construct: his6-MBP-TEVsite-PDZ

Protein B

Protein: PLCB4
Fragment: 1166-1175
Site: PBM
Sequence: EMDRRPATVV
Construct: Biotin-ado-ado-EMDRRPATVV
Average holdup BI: 0.24
Normalized holdup BI: 0.4
Immobilized partner concentration (10-6M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pKd: 4.61
PUBMED ID: 36115835
Experimental Details

Crude peptide synthesis product. The peptide concentration in the affinity conversion step may differ from reality. Not reported internal standards of holdup layout #6

Experiment series 2

Protein A

Protein: ARHGEF11
Fragment: 41-126
Site: PDZ
Construct: his6-MBP-TEVsite-PDZ

Protein B

Protein: PLCB4
Fragment: 1166-1175
Site: PBM
Sequence: EMDRRPATVV
Construct: biotin-ttds-EMDRRPATVV
Average holdup BI: 0.32
Normalized holdup BI: 0.4
Immobilized partner concentration (10-6M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Number of measurements: 1
Measured pKd: 4.6
PUBMED ID: 36115835